,

Nutritious Whole Grain Muffins

As seen in: Morning Meals to Start Your Day Right

These wholesome apple muffins combine grated fresh apple with whole wheat flour, wheat bran, and almond meal for a nutritious breakfast option. Sweetened with honey, brown sugar and applesauce rather than excess refined sugar, each muffin contains just 151 calories while providing 4g of fiber.

The simple preparation involves mixing your wet and dry ingredients separately, folding in grated apple and walnuts, then topping with crunchy granola before baking. Perfect for meal prep - they store well at room temperature for 5 days or freeze for up to 3 months.

A woman named Sophie is smiling and holding a plate of food.
Created By Sophie
Last updated on Sun, 27 Apr 2025 16:34:09 GMT
Two muffins with nuts on top. Save Pin
Two muffins with nuts on top. | sophietable.com

This hearty apple muffin recipe has become my go-to weekend breakfast treat that satisfies my sweet tooth without the guilt. Made with whole grains and fresh apples, these muffins deliver warmth and comfort while still keeping nutrition in focus.

I first created these muffins when trying to find healthier alternatives for my family's breakfast routine. What started as an experiment has become our most requested morning treat whenever apple season arrives.

Ingredients

  • Whole wheat flour provides a hearty texture and nutty flavor while adding extra fiber
  • Wheat bran flour boosts the nutritional profile with additional fiber and minerals
  • Fresh apple adds natural sweetness and moisture without excess sugar
  • Applesauce replaces most of the oil keeping these muffins light and lower in fat
  • Cinnamon and nutmeg create that classic warm apple spice flavor that makes these irresistible
  • Walnuts offer healthy fats and a satisfying crunch in every bite
  • Granola topping creates a delightful textural contrast and slight sweetness

Step-by-Step Instructions

Prepare Your Equipment
Preheat your oven to 350°F and prepare your muffin tin by lining with paper cups and giving them a very light spray of cooking oil. This prevents sticking and makes removal effortless.
Season The Apple
Mix your freshly grated apple with cinnamon, honey and lemon juice in a small bowl. This step infuses the apple with flavor and prevents browning while giving the fruit a chance to release some juices.
Mix Dry Ingredients
Whisk together whole wheat flour, bran, almond meal, baking soda, nutmeg, cinnamon and salt until evenly incorporated. This ensures even distribution of leavening agents and spices throughout your muffins.
Blend Wet Components
In a larger bowl combine applesauce, oil, egg whites, brown sugar and vanilla until smooth and well incorporated. The mixture should look uniform with no streaks of egg whites visible.
Combine Mixtures
Gently fold the dry ingredients into the wet mixture until just combined, then incorporate the seasoned apples and walnuts. Take care not to overmix as this develops gluten and creates tough muffins.
Fill The Muffin Cups
Spoon the thick batter into your prepared muffin cups, filling them nearly to the top. Remember that properly filled cups make for beautifully domed muffins.
Top And Bake
Sprinkle each muffin with granola for a crunchy topping, then bake for 30-35 minutes until a toothpick comes out clean. Allow to cool in the pan for 10 minutes before transferring to a wire rack.
A plate of muffins with a nut on top. Save Pin
A plate of muffins with a nut on top. | sophietable.com

The almond meal is my secret ingredient in these muffins. It adds moisture and a subtle nutty flavor while boosting the protein content. My daughter now insists we always have a batch in the freezer for busy school mornings.

Texture Troubleshooting

The ideal batter consistency for these muffins should be thick and spoonable rather than pourable. If your batter seems too wet, add a tablespoon of whole wheat flour at a time until it reaches the right consistency. Conversely, if it seems too dry, a small amount of additional applesauce will help. The moisture content of apples can vary greatly depending on variety and freshness, which may require these small adjustments.

Storage Solutions

These muffins keep beautifully at room temperature for 3-5 days when stored in an airtight container or sealed bag. For longer storage, wrap individual muffins in foil and place in a freezer bag where they will maintain their quality for up to three months. To reheat from frozen, unwrap and microwave for 30 seconds or warm in a 300°F oven for about 10 minutes.

Customization Options

These versatile muffins welcome many variations to suit your taste preferences. Try substituting pears for apples in the fall, or mix in dried cranberries for a tart contrast. The almond meal can be replaced with additional whole wheat flour if nut allergies are a concern. For extra sweetness without added sugar, consider using Honeycrisp or Gala apples which tend to be naturally sweeter than other varieties.

A plate of muffins with nuts on top. Save Pin
A plate of muffins with nuts on top. | sophietable.com

Commonly Asked Questions

→ How do I ensure my apple muffins rise properly?

For properly risen muffins, ensure your batter is thick and spoonable (not pourable), use room temperature ingredients, and fill your muffin tins nearly full. These techniques allow for maximum rise during baking.

→ Can I substitute ingredients in these apple muffins?

Yes! You can swap canola oil for melted coconut oil, use all-purpose flour instead of wheat bran flour, or replace walnuts with pecans. The applesauce is essential for moisture, but you could substitute mashed banana for a different flavor profile.

→ How should I store apple muffins to keep them fresh?

Store apple muffins in a sealed container or bag at room temperature for 3-5 days. For longer storage, wrap individual muffins in aluminum foil and place in a freezer bag where they'll keep for up to 3 months.

→ Why are my apple muffins too wet or dense?

Overly wet or dense muffins usually result from too much applesauce or liquid in the batter. Ensure you properly measure ingredients and remember that the batter should be thick and spoonable, not runny. Adding a bit more flour can help correct a too-wet batter.

→ What type of apples work best in these muffins?

Firm, tart apples like Granny Smith, Honeycrisp, or Pink Lady work best as they hold their shape during baking and provide a nice contrast to the sweetness. Avoid softer varieties like Red Delicious which can become mushy.

→ Can I make these apple muffins vegan?

Yes! Replace egg whites with flax eggs (1 tablespoon ground flaxseed mixed with 2.5 tablespoons water per egg white), use maple syrup instead of honey, and ensure your granola is vegan-friendly.

Wholesome Apple Muffins

Nutritious muffins packed with fresh apples, whole grains, and warming spices - ideal for grab-and-go breakfast at just 151 calories.

Preparation Time
15 Minutes
Cooking Duration
35 Minutes
Overall Time
50 Minutes
Created By: Sophie

Recipe Type: Breakfast

Skill Level: Simple

Cuisine Type: American

Portion Size: 12 Number of Servings (12 muffins)

Diet Preferences: Vegetarian-Friendly, Dairy-Free

What You'll Need

→ Apple Mixture

01 1 large apple, peeled, cored and grated
02 ¾ teaspoon ground cinnamon
03 1 tablespoon honey
04 1 teaspoon lemon juice

→ Dry Ingredients

05 ¾ cup whole wheat flour
06 ¾ cup coarse wheat bran flour
07 ¼ cup almond meal
08 1 teaspoon baking soda
09 ½ teaspoon ground nutmeg
10 ⅛ teaspoon salt

→ Wet Ingredients

11 1½ cups applesauce
12 1 tablespoon canola oil
13 2 egg whites
14 ¼ cup packed brown sugar
15 2 teaspoons vanilla extract

→ Mix-ins and Toppings

16 ½ cup chopped walnuts
17 ¼ cup granola

Step-by-Step Directions

Step 01

Preheat oven to 350°F (175°C). Line a 12-cup muffin tray with paper liners and lightly spray them with cooking spray.

Step 02

In a small bowl, combine the grated apple, ¼ teaspoon of cinnamon, honey, and lemon juice. Stir well and set aside.

Step 03

In a medium bowl, whisk together whole wheat flour, wheat bran, almond meal, baking soda, nutmeg, remaining cinnamon, and salt. Set aside.

Step 04

In a larger bowl, thoroughly whisk together applesauce, canola oil, egg whites, brown sugar, and vanilla extract until well incorporated.

Step 05

Gradually incorporate the flour mixture into the wet ingredients, whisking until well combined. Fold in the prepared apple mixture and chopped walnuts.

Step 06

Spoon the batter into the prepared muffin cups, filling each nearly to the top. Sprinkle ½-1 teaspoon of granola over each muffin.

Step 07

Bake for 30-35 minutes or until a toothpick inserted in the center comes out clean. Allow muffins to cool for 10 minutes in the pan, then transfer to a wire rack to cool completely.

Helpful Notes

  1. Ensure the batter is thick and spoonable, not pourable. If too wet, add more flour or reduce applesauce.
  2. Using room temperature ingredients helps the baking process for optimal rise and texture.
  3. Fill muffin tins nearly full to achieve a good rise during baking.
  4. Store muffins in a sealed bag at room temperature for 3-5 days.
  5. These muffins can be frozen for up to 3 months by wrapping in foil and placing in a freezer bag.

Recommended Tools

  • Glass Mixing Bowl Set
  • 12-Cup Muffin Pan
  • Cooling Rack

Allergen Information

Always review ingredients for any allergens and consult a healthcare provider with any concerns.
  • Contains tree nuts (walnuts and almond meal)
  • May contain gluten from whole wheat flour and granola

Nutritional Information (Per Serving)

These details are estimates and shouldn't be considered professional health advice.
  • Calories: 151
  • Fat Content: 6 grams
  • Carbohydrate Content: 23 grams
  • Protein Content: 4 grams